BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023D07LP1|AL428045
(1007 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1541 1970 0.0
>3x_Contig1541
Length = 10565
Score = 1970 bits (992), Expect = 0.0
Identities = 998/1002 (99%)
Strand = Plus / Minus
Query: 6 attgmatggaaaaaacaaatcagcatttgtttacgaattacttaaaataaaccataatcc 65
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 attgcatggaaaaaacaaatcagcatttgtttacgaattacttaaaataaaccataatcc 1864
Query: 66 gtacagtttggagccagggtccaggcttatttcttcgacattagctcgaccattcaggtt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 gtacagtttggagccagggtccaggcttatttcttcgacattagctcgaccattcaggtt 1804
Query: 126 cttctatgcaaggcaccgcatggaaatacaattagtatttattcatgcgttatcaattga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 cttctatgcaaggcaccgcatggaaatacaattagtatttattcatgcgttatcaattga 1744
Query: 186 gaaagttccttgagaaaacaatcagtgagtgtttggcacaagtttgatattagcgtttga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 gaaagttccttgagaaaacaatcagtgagtgtttggcacaagtttgatattagcgtttga 1684
Query: 246 tgttgtgaaattatttcttatttaattagtattaagatattatgattattactagtgtta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 tgttgtgaaattatttcttatttaattagtattaagatattatgattattactagtgtta 1624
Query: 306 ttattgatgttaatatcattatgtgtaagcttgacggaggtgagcgaggagtgtggtgag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 ttattgatgttaatatcattatgtgtaagcttgacggaggtgagcgaggagtgtggtgag 1564
Query: 366 tggaaggggtcctgatgcgaatagctccaagctttttttttttttttcactgtccattct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 tggaaggggtcctgatgcgaatagctccaagctttttttttttttttcactgtccattct 1504
Query: 426 ttgtccttttcaaggattgtctgtccttcgagtaattcgacctcaatgagatcatgcgtc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 ttgtccttttcaaggattgtctgtccttcgagtaattcgacctcaatgagatcatgcgtc 1444
Query: 486 acgcatctctttgaatcctatatttttattatgtctctttcttttaaccaattgcaggat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 acgcatctctttgaatcctatatttttattatgtctctttcttttaaccaattgcaggat 1384
Query: 546 gttgaaattataggatatcatcttgacctgggttacagttctcataattcaagaacttca 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 gttgaaattataggatatcatcttgacctgggttacagttctcataattcaagaacttca 1324
Query: 606 agatgtgccacaaagcggcagacatgatggcaccaagacctggaccaatccagtaaatcc 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 agatgtgccacaaagcggcagacatgatggcaccaagacctggaccaatccagtaaatcc 1264
Query: 666 aatggtagttagggaaagaggcagcagcgatacatggaccgaaagatctggctgggttca 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 aatggtagttagggaaagaggcagcagcgatacatggaccgaaagatctggctgggttca 1204
Query: 726 aaccggcaccggtgtagtaaacacagatcaagtgaccaacaaacaatgcaataccaatgg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 aaccggcaccggtgtagtaaacacagatcaagtgaccaacaaacaatgcaataccaatgg 1144
Query: 786 cgaatggagccattggggtagccttatgcttttcaacggccatgaacaaaacggtggtac 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 cgaatggagccattggggtagccttatgcttttcaacggccatgaacaaaacggtggtac 1084
Query: 846 ataggattgcggtaccgaagcyttccaagaaaacacctctggatctggaagcaccaccac 905
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 ataggattgcggtaccgaaggcttccaagaaaacacctctggatctggaagcaccaccac 1024
Query: 906 ctagaccgttagcgaataagatttcacctggggtcatggcagaagcagcacctgcagcag 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 ctagaccgttagcgaataagatttcacctggggtcatggcagaagcagcacctgcagcag 964
Query: 966 ccataccggcaaccatttgactgatccacatgamaagagctc 1007
||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 963 ccataccggcaaccatttgactgatccacatgacaagagctc 922
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,479
Number of Sequences: 1807
Number of extensions: 16479
Number of successful extensions: 2241
Number of sequences better than 1.0e-20: 1
length of query: 1007
length of database: 10,358,551
effective HSP length: 16
effective length of query: 991
effective length of database: 10,329,639
effective search space: 10236672249
effective search space used: 10236672249
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)